Publications

Schell J, Kaulen H, Kreuzaler F, Eckes P, Rosahl S, Willmitzer L, Spena A, Baker B, Herrera-Estrella L, Fedoroff N.  1985.  Transfer and regulation of expression of chimeric genes in plants. Cold Spring Harbor symposia on quantitative biology. 50:421-31.

Czernilofsky AP, Hain R, Baker B, Wirtz U.  1986.  Studies of the structure and functional organization of foreign DNA integrated into the genome of Nicotiana tabacum. DNA (Mary Ann Liebert, Inc.). 5(6):473-82.

Laufs J, Wirtz U, Kammann M, Matzeit V, Schaefer S, Schell J, Czernilofsky AP, Baker B, Gronenborn B.  1990.  Wheat dwarf virus Ac/Ds vectors: expression and excision of transposable elements introduced into various cereals by a viral replicon. Proceedings of the National Academy of Sciences of the United States of America. 87(19):7752-6.

Honma MA, Baker BJ, Waddell CS.  1993.  High-frequency germinal transposition of DsALS in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 90(13):6242-6.

Whitham S, Dinesh-Kumar SP, Choi D, Hehl R, Corr C, Baker B.  1994.  The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor. Cell. 78(6):1101-15. Whitham. et al. N isolation_Toll-IL-R1 Similarity Cell.1994.pdf (1.73 MB)

Osborne BI, Wirtz U, Baker B.  1995.  A system for insertional mutagenesis and chromosomal rearrangement using the Ds transposon and Cre-lox. The Plant journal : for cell and molecular biology. 7(4):687-701.

Dinesh-Kumar SP, Whitham S, Choi D, Hehl R, Corr C, Baker B.  1995.  Transposon tagging of tobacco mosaic virus resistance gene N: its possible role in the TMV-N-mediated signal transduction pathway. Proceedings of the National Academy of Sciences of the United States of America. 92(10):4175-80. Kumar et al.Transposon tagging N.PNAS_.1995.pdf (1.36 MB)

Whitham S, McCormick S, Baker B.  1996.  The N gene of tobacco confers resistance to tobacco mosaic virus in transgenic tomato. Proceedings of the National Academy of Sciences of the United States of America. 93(16):8776-81.

Wirtz U, Osborne B, Baker B.  1997.  Ds excision from extrachromosomal geminivirus vector DNA is coupled to vector DNA replication in maize. The Plant journal : for cell and molecular biology. 11(1):125-35.

Ronning CM, Stegalkina SS, Ascenzi RA, Bougri O, Hart AL, Utterbach TR, Vanaken SE, Riedmuller SB, White JA, Cho J et al..  2003.  Comparative analyses of potato expressed sequence tag libraries. Plant physiology. 131(2):419-29.

Hu G, deHart AKA, Li Y, Ustach C, Handley V, Navarre R, Hwang C-F, Aegerter BJ, Williamson VM, Baker B.  2005.  EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. The Plant journal : for cell and molecular biology. 42(3):376-91. Hu et al.EDS1TIR-RLP ResistanceTomato.PJ_.2005.pdf (943.43 KB)

Kuang H, Wei F, Marano M R, Wirtz U, Wang X, Liu J, Shum W P, Zaborsky J, Tallon LJ, Rensink W et al..  2005.  The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum. The Plant journal : for cell and molecular biology. 44(1):37-51.

Kuang H, Wei F, Marano M R, Wirtz U, Wang X, Liu J, Shum W P, Zaborsky J, Tallon LJ, Rensink W et al..  2005.  The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum. The Plant journal : for cell and molecular biology. 44(1):37-51.

Kuang H, Wei F, Marano M R, Wirtz U, Wang X, Liu J, Shum W P, Zaborsky J, Tallon LJ, Rensink W et al..  2005.  The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum. The Plant journal : for cell and molecular biology. 44(1):37-51.

Yuan X, Yan C, Wu Z, Ren F, Zhang H, Baker B, Chen J, Kuang H.  2015.  Frequent Gain and Loss of Resistance against Tobacco Mosaic Virus in Nicotiana Species. Molecular plant. Yuan et al. Gain Loss TMV Resistance.2015.MolPlant.CellPress.pdf (374.35 KB)

Shi Y-F, Wang D-L, Wang C, Culler A H, Kreiser MA, Suresh J, Cohen JD, Pan J, Baker B, Liu J-Z.  2015.  Loss of GSNOR1 Function Leads to Compromised Auxin Signaling and Polar Auxin Transport. Molecular plant. 8(9):1350-65. GSNOR1.Mol_.Plant_.2015.pdf (654.61 KB)

Shi Y-F, Wang D-L, Wang C, Culler A H, Kreiser MA, Suresh J, Cohen JD, Pan J, Baker B, Liu J-Z.  2015.  Loss of GSNOR1 Function Leads to Compromised Auxin Signaling and Polar Auxin Transport. Molecular plant. 8(9):1350-65. GSNOR1.Mol_.Plant_.2015.pdf (654.61 KB)

Deng Y, Wang J, Tung J, Liu D, Zhou Y, He S, Du Y, Baker B, Li F.  2018.  A role for small RNA in regulating innate immunity during plant growth. PLOS Pathogens. 14(1) Deng et al. sRNA Regulating Innate Immunity PLOS Pathogens.pdf (856.94 KB)

Deng Y, Wang J, Tung J, Liu D, Zhou Y, He S, Du Y, Baker B, Li F.  2018.  A role for small RNA in regulating innate immunity during plant growth.. PLoS Pathog. 14(1):e1006756.

Lan H-J, Ran J, Wang W-X, Zhang L, Wu N-N, Zhao Y-T, Huang M-J, Ni M, Liu F, Cheng N et al..  2024.  Clathrin light chains negatively regulate plant immunity by hijacking the autophagy pathway.. Plant Commun. 5(8):100937.

Lan H-J, Ran J, Wang W-X, Zhang L, Wu N-N, Zhao Y-T, Huang M-J, Ni M, Liu F, Cheng N et al..  2024.  Clathrin light chains negatively regulate plant immunity by hijacking the autophagy pathway.. Plant Commun. 5(8):100937.

Lan H-J, Ran J, Wang W-X, Zhang L, Wu N-N, Zhao Y-T, Huang M-J, Ni M, Liu F, Cheng N et al..  2024.  Clathrin light chains negatively regulate plant immunity by hijacking the autophagy pathway.. Plant Commun. 5(8):100937.

Zhang Q, Wang J, Li Y, Tung J, Deng Y, Baker B, Dinesh-Kumar SP, Li F.  2024.  Conserved transcription factors NRZ1 and NRM1 regulate NLR receptor-mediated immunity.. Plant Physiol. 195(1):832-849.

Wang J, Zhang Q, Tung J, Zhang X, Liu D, Deng Y, Tian Z, Chen H, Wang T, Yin W et al..  2024.  High-quality assembled and annotated genomes of Nicotiana tabacum and Nicotiana benthamiana reveal chromosome evolution and changes in defense arsenals.. Mol Plant. 17(3):423-437.

Wang J, Zhang Q, Tung J, Zhang X, Liu D, Deng Y, Tian Z, Chen H, Wang T, Yin W et al..  2024.  High-quality assembled and annotated genomes of Nicotiana tabacum and Nicotiana benthamiana reveal chromosome evolution and changes in defense arsenals.. Mol Plant. 17(3):423-437.