University of California, Berkeley | Plant & Microbial Biology
Publications
Found 46 results
Author [ Title] Type Year Filters: Downloads is Baker.phenoAc.embo.87.pdf [Clear All Filters]
Wheat dwarf virus Ac/Ds vectors: expression and excision of transposable elements introduced into various cereals by a viral replicon. Proceedings of the National Academy of Sciences of the United States of America. 87(19):7752-6.
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1990. VPEgamma exhibits a caspase-like activity that contributes to defense against pathogens. Current biology : CB. 14(21):1897-906.
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2004. Virus-induced gene silencing in Solanum species. The Plant journal : for cell and molecular biology. 39(2):264-72. Brigneti et al. VIGS in Solanum.PJ_.2004.pdf (250.87 KB)
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2004. A Two-Headed Monster to Avert Disaster: HBS1/SKI7 Is Alternatively Spliced to Build Eukaryotic RNA Surveillance Complexes. Frontiers in Plant Science. 9(10.3389/fpls.2018.01333) HBS1/SKI7 Is Alternatively Spliced for RNA Surveillance (3.66 MB)
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2018. Transposon tagging of tobacco mosaic virus resistance gene N: its possible role in the TMV-N-mediated signal transduction pathway. Proceedings of the National Academy of Sciences of the United States of America. 92(10):4175-80. Kumar et al.Transposon tagging N.PNAS_.1995.pdf (1.36 MB)
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1995. Transposition of the maize controlling element "Activator" in tobacco. Proceedings of the National Academy of Sciences of the United States of America. 83(13):4844-8.
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1986. Transfer and regulation of expression of chimeric genes in plants. Cold Spring Harbor symposia on quantitative biology. 50:421-31.
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1985. The tomato resistance protein Bs4 is a predicted non-nuclear TIR-NB-LRR protein that mediates defense responses to severely truncated derivatives of AvrBs4 and overexpressed AvrBs3. The Plant journal : for cell and molecular biology. 37(1):46-60.
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2004. A system for insertional mutagenesis and chromosomal rearrangement using the Ds transposon and Cre-lox. The Plant journal : for cell and molecular biology. 7(4):687-701.
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1995. Studies of the structure and functional organization of foreign DNA integrated into the genome of Nicotiana tabacum. DNA (Mary Ann Liebert, Inc.). 5(6):473-82.
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1986. Structure-function analysis of the tobacco mosaic virus resistance gene N. Proceedings of the National Academy of Sciences of the United States of America. 97(26):14789-94.
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2000. SoMART: a web server for plant miRNA, tasiRNA and target gene analysis. The Plant journal : for cell and molecular biology. 70(5):891-901. Li et al.SoMART.Server.miRNA_.PJ_.2012.pdf (1.41 MB)
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2012. A role for small RNA in regulating innate immunity during plant growth. PLOS Pathogens. 14(1) Deng et al. sRNA Regulating Innate Immunity PLOS Pathogens.pdf (856.94 KB)
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2018. The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum. The Plant journal : for cell and molecular biology. 44(1):37-51.
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2005. Properties of the maize transposable element Activator in transgenic tobacco plants: a versatile inter-species genetic tool. The Plant cell. 2(8):709-21.
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1990. The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor. Cell. 78(6):1101-15. Whitham. et al. N isolation_Toll-IL-R1 Similarity Cell.1994.pdf (1.73 MB)
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1994. Phenotypic assay for excision of the maize controlling element Ac in tobacco. The EMBO journal. 6(6):1547-54.
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1987. The N gene of tobacco confers resistance to tobacco mosaic virus in transgenic tomato. Proceedings of the National Academy of Sciences of the United States of America. 93(16):8776-81.
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1996. Movers and shakers: maize transposons as tools for analyzing other plant genomes. Current opinion in cell biology. 7(3):406-13. Osborne and Baker.Transposons_Plant Genomes.CurrBio.1995.pdf (2.08 MB)
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1995. MicroRNA regulation of plant innate immune receptors. Proceedings of the National Academy of Sciences of the United States of America. 109(5):1790-5. Li et al. miRNA.Innate.Immune.Receptors.PNAS_.2012.pdf (3.95 MB)
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2012. Marker-assisted selection of Columbia Root-Knot nematode resistance introgressed from Solanum bulbocastanum. Crop Science. 47:2021-2026.
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2007. Loss of GSNOR1 Function Leads to Compromised Auxin Signaling and Polar Auxin Transport. Molecular plant. 8(9):1350-65. GSNOR1.Mol_.Plant_.2015.pdf (654.61 KB)
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2015. Linked and unlinked transposition of a genetically marked Dissociation element in transgenic tomato. Genetics. 134(2):571-84.
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1993. Interactions between tobacco mosaic virus and the tobacco N gene. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 354(1383):653-8.
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1999. Interaction between two mitogen-activated protein kinases during tobacco defense signaling. The Plant journal : for cell and molecular biology. 34(2):149-60. Liu et al. WIPK SIPK Resistance.PJ_.2003.pdf (291.67 KB)
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2003. Induced transposition of Ds by a stable Ac in crosses of transgenic tobacco plants. Molecular & general genetics : MGG. 217(1):53-9.
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1989. Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs. Genome research. 19(1):42-56. Kuang et al.Sol-MITEs Transposons_Function.GenRes.2009.pdf (892.26 KB)
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2009. Identification of I-7 expands the repertoire of genes for resistance to Fusarium wilt in tomato to three resistance gene classes. Molecular plant pathology. 17(3):448-63. Gonzalez-Cendales 2016 I-7 paper.pdf (582.9 KB)
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2016. High-frequency germinal transposition of DsALS in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 90(13):6242-6.
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1993. The helicase domain of the TMV replicase proteins induces the N-mediated defence response in tobacco. The Plant journal : for cell and molecular biology. 18(1):67-75.
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1999. Genesis of a virus-transforming gene. National Cancer Institute monograph. (48):219-23.
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1978. Function of a mitogen-activated protein kinase pathway in N gene-mediated resistance in tobacco. The Plant journal : for cell and molecular biology. 33(4):719-31. Jin et al. MEKK1-like in Plant Innate Immunity.Dev Cell.2002.pdf (1.03 MB)
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2003. Frequent Gain and Loss of Resistance against Tobacco Mosaic Virus in Nicotiana Species. Molecular plant. Yuan et al. Gain Loss TMV Resistance.2015.MolPlant.CellPress.pdf (374.35 KB)
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2015. Fate of selectable marker DNA integrated into the genome of Nicotiana tabacum. DNA (Mary Ann Liebert, Inc.). 5(2):101-13.
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1986. EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. The Plant journal : for cell and molecular biology. 42(3):376-91. Hu et al.EDS1TIR-RLP ResistanceTomato.PJ_.2005.pdf (943.43 KB)
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2005. Ds excision from extrachromosomal geminivirus vector DNA is coupled to vector DNA replication in maize. The Plant journal : for cell and molecular biology. 11(1):125-35.
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1997. Comparative genomics enabled the isolation of the R3a late blight resistance gene in potato. The Plant journal : for cell and molecular biology. 42(2):251-61.
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2005. Comparative analyses of potato expressed sequence tag libraries. Plant physiology. 131(2):419-29.
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2003. Chromosome landing at the tomato Bs4 locus. Molecular genetics and genomics : MGG. 266(4):639-45.
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2001. Characterization of the maize transposable element Ac by internal deletions. The EMBO journal. 7(12):3653-9.
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1978. Analysis of endogenous avian retrovirus DNA and RNA: viral and cellular determinants of retrovirus gene expression. Virology. 114(1):8-22.
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1981. Amplification of genomic sequences flanking transposable elements in host and heterologous plants: a tool for transposon tagging and genome characterization. Nucleic acids research. 18(11):3271-9.
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1990. Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance. Proceedings of the National Academy of Sciences of the United States of America. 97(4):1908-13. Kumar et al.Alternative Splicing N.PNAS_.2000.pdf (381.37 KB)
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